MolNFT v1 · #187277 · protein

Plasmodium falciparum protein PF12 bound to nanobody G7

7S7R: “Plasmodium falciparum protein PF12 bound to nanobody G7”. X-ray diffraction, 3 ligands (NAG, NA, SCN). MolNFT v1 #187277 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7S7R
Type: protein
Length: 388 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: C6KSX0
Ligands: NAG, NA, SCN

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	270	—	C6KSX0
B	—	protein	118	—	—

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A, B
NA · Sodium ion · metal · chains B
SCN · Thiocyanate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7S7R · Plasmodium falciparum protein Pf12 bound to nanobody G7 · the same entry in another collection · chain A against A, TM-score 1.00
C6KSX0 · AlphaFold monomer V2.0 prediction for merozoite surface protein P12 (C6KSX0) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C6KSX0
Elsewhere: RCSB PDB 7S7R · PDBe 7S7R · UniProt C6KSX0

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