MolNFT v1 · #187213 · protein
PCSK9(DELTACRD) in complex with cyclic peptide 35
7S5H: “PCSK9(DELTACRD) in complex with cyclic peptide 35”. X-ray diffraction, 4 ligands (8DN, MPT, DHL). MolNFT v1 #187213 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7S5H
- Type
- protein
- Length
- 330 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8NBP7
- Ligands
- 8DN, MPT, DHL, 89N
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 92 | — | Q8NBP7 |
| B | — | protein | 230 | — | Q8NBP7 |
| C | — | protein | 8 | — | — |
Ligands and binding sites
- 8DN · 1-(3,5-dimethylphenyl)-4-methyl-1H-1,2,3-triazole · ligand · chains C
- MPT · Beta-mercaptopropionic acid · ligand · chains B, C
- DHL · 2-amino-ethanethiol · ligand · chains C
- 89N · (2E)-but-2-ene-1,4-diol · ligand · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7S5H · PCSK9(deltaCRD) in complex with cyclic peptide 35 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NBP7
- Elsewhere: RCSB PDB 7S5H · PDBe 7S5H · UniProt Q8NBP7
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