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Ligand · DHL

DHL · 2-amino-ethanethiol

DHL, 2-amino-ethanethiol (C2 H7 N S, 77.2 g/mol), in the MolNFT structures on GenesisL1: bound in 23 records (17 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
DHL
Formula
C2 H7 N S
Class
ligand
Structures
23
PDB entries
17

Binding sites

DHL in 23 structures; the first of them:

  • 2Y8D · Structure of DBL6 epsilon domain from VAR2CSA strain FCR3 · DHL A3630 · binds VAL2419, LEU2477, TYR2480, THR2489, GLU2491, CYS2493
  • 3Q1L · Crystals Structure of Aspartate beta-Semialdehyde Dehydrogenase from Streptococcus… · DHL A367 · binds ASN127, CYS128, GLN155, GLY159, ILE209, GLU220, ARG245, HIS252
  • 3SOM · crystal structure of human MMACHC · DHL A601 · binds PRO152, HIS180, CYS182, VAL209
  • 4CG4 · Crystal structure of the CHS-B30.2 domains of TRIM20 · DHL C1 · binds PHE636, CYS639, ILE641, SER675, ARG676, LYS677, GLY678, ASN679 and 2 more
  • 4PA5 · Tgl - a bacterial spore coat transglutaminase - cystamine complex · DHL A2006 · binds PHE69, GLU115, CYS116, GLN183, GLY186, GLU187, ASN188
  • 5EJ0 · The vaccinia virus H3 envelope protein, a major target of neutralizing antibodies… · DHL A701 · binds PHE82, SER83, GLY84, PHE85, CYS86, MET89, CYS90, LYS95 and 3 more
  • 8CMB · Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Spike peptide S486-505 · DHL C101 · binds SER53, PHE54, GLU55, PHE1, CYS3, TYR4
  • 8CMH · Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Omicron (BA.1) Spike… · DHL C101 · binds SER53, PHE54, GLU55, PHE1, CYS3, TYR4
  • 8D64 · ELIC with cysteamine in POPC nanodisc · DHL A401 · binds GLU77, ILE79, GLU131, PRO132, PHE133, TYR175, HIS177, LEU178 and 2 more
  • 8D66 · ELIC with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc · DHL A501 · binds GLU77, ILE79, GLU131, PRO132, PHE133, TYR175, HIS177, LEU178 and 3 more
  • 8D67 · ELIC3 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc · DHL A401 · binds GLU77, ILE79, GLU131, PRO132, PHE133, TYR175, HIS177, LEU178 and 3 more

Residues it binds most

CYS 58, PHE 35, GLU 34, HIS 54, TYR 34, PRO 52, ILE 40, ASN 31, LEU 29, VAL 29 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • SO4 · Sulfate ion
  • FLC · Citrate anion
  • EOH · Ethanol
  • MOH · Methanol
  • PDO · 1,3-propandiol
  • PG0 · 2-(2-methoxyethoxy)ethanol
  • PGE · Triethylene glycol
  • POL · N-propanol
  • 5AD · 5'-deoxyadenosine
  • 89N · (2E)-but-2-ene-1,4-diol

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