MolNFT v1 · #187144 · protein
Crystal structure of the E100A mutant tir domain from the grapevine disease resistance protein RUN1 bound to NAD
7S2Z: “Crystal structure of the E100A mutant tir domain from the grapevine disease resistance protein RUN1 bound to…”. X-ray diffraction, 2 ligands (NAD, SO4). MolNFT v1 #187144 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7S2Z
- Type
- protein
- Length
- 684 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- V9M398
- Ligands
- NAD, SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 171 | — | V9M398 |
| B | — | protein | 173 | — | V9M398 |
| C, D | — | protein | 170 | — | V9M398 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 18 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7S2Z · Crystal structure of the E100A mutant TIR domain from the grapevine disease resistance… · the same entry in another collection · chain A against A, TM-score 1.00
- V9M398 · AlphaFold monomer V2.0 prediction for disease resistance protein RUN1 (V9M398) · a predicted model of the same protein · chain C against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V9M398
- Elsewhere: RCSB PDB 7S2Z · PDBe 7S2Z · UniProt V9M398
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