MolNFT v1 · #187084 · protein
Crystal structure of penicillium verruculosum copalyl diphosphate synthase (pvcps) alpha prenyltransferase domain variant, S723F
7S0L · Terpene synthase: “Crystal structure of penicillium verruculosum copalyl diphosphate synthase (pvcps) alpha prenyltransferase…”. X-ray diffraction, 5 pockets (best druggability 0.78). MolNFT v1 #187084 on GenesisL1: 3D structure…
- PDB
- 7S0L
- Type
- protein
- Length
- 608 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Terpene synthase
- UniProt
- A0A348FUE1
- Pockets
- 5 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Terpene synthase | protein | 304 | 75% helix, 1% strand | A0A348FUE1 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 519 | 0.78 | 0.85 | 56 | empty |
| 2 | 522 | 0.78 | 0.85 | 59 | empty |
| 3 | 57 | 0.40 | 0.81 | 15 | empty |
| 4 | 59 | 0.40 | 0.81 | 16 | empty |
| 5 | 67 | 0.30 | 0.74 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 2704 Ų buried · 37 hydrogen bonds · protein-protein
Compared structures
- 7S0L · Crystal structure of Penicillium verruculosum copalyl diphosphate synthase (PvCPS) alpha… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A348FUE1
- Elsewhere: RCSB PDB 7S0L · PDBe 7S0L · UniProt A0A348FUE1
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