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Crystal structure of penicillium verruculosum copalyl diphosphate synthase (pvcps) alpha prenyltransferase domain variant, S723F

Analyse Crystal structure of penicillium verruculosum copalyl diphosphate synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7S0L
Type: protein
Length: 608 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Terpene synthase
UniProt: A0A348FUE1
Pockets: 5 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Terpene synthase	protein	304	75% helix, 1% strand	A0A348FUE1

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	519	0.78	0.85	56	empty
2	522	0.78	0.85	59	empty
3	57	0.40	0.81	15	empty
4	59	0.40	0.81	16	empty
5	67	0.30	0.74	14	empty

Interfaces

1 interface between chains.

A–B · 2704 Å² buried · 37 hydrogen bonds · protein-protein

Compared structures

7S0L · Crystal structure of Penicillium verruculosum copalyl diphosphate synthase (PvCPS) alpha… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A348FUE1
Elsewhere: RCSB PDB 7S0L · PDBe 7S0L · UniProt A0A348FUE1

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