MolNFT v1 · #187042 · protein
Structure of the complex of lbd-tmd part of AMPA receptor GLUA2 with auxiliary subunit tarp gamma-5 bound to agonist quisqualate
7RZ8: “Structure of the complex of lbd-tmd part of AMPA receptor GLUA2 with auxiliary subunit tarp gamma-5 bound to…”. Electron microscopy, 2 ligands (PCW, QUS). MolNFT v1 #187042 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7RZ8
- Type
- protein
- Length
- 2,044 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P19491
- Ligands
- PCW, QUS
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 609 | — | P19491 |
| B, D | — | protein | 413 | — | P19491 |
Ligands and binding sites
- PCW · 1,2-dioleoyl-sn-glycero-3-phosphocholine · ligand · 22 copies · chains A, D, B, C
- QUS · (S)-2-amino-3-(3,5-dioxo-[1,2,4]oxadiazolidin-2-yl)-propionic acid · ligand · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RZ8 · Structure of the complex of LBD-TMD part of AMPA receptor GluA2 with auxiliary subunit… · the same entry in another collection · chain D against D, TM-score 1.00
- P19491 · AlphaFold monomer V2.0 prediction for glutamate receptor 2 (P19491) · a predicted model of the same protein · chain B against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19491
- Elsewhere: RCSB PDB 7RZ8 · PDBe 7RZ8 · UniProt P19491
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