MolNFT v1 · #186983 · protein

Crystal structure of a zn-bound RIDC1 variant

7RWW: “Crystal structure of a zn-bound RIDC1 variant”. X-ray diffraction, 2 ligands (HEC, ZN). MolNFT v1 #186983 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7RWW
Type: protein
Length: 424 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0ABE7
Ligands: HEC, ZN

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	—	protein	106	—	P0ABE7

Ligands and binding sites

HEC · Heme C · ligand · 4 copies · chains A, B, C, D
ZN · Zinc ion · metal · 5 copies · chains A, D, B, C
MPD · (4S)-2-methyl-2,4-pentanediol · additive · 3 copies · chains B, D, A, C
MRD · (4R)-2-methylpentane-2,4-diol · additive · chains A, C
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7RWW · Crystal structure of a Zn-bound RIDC1 variant · the same entry in another collection · chain D against D, TM-score 1.00
P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0ABE7
Elsewhere: RCSB PDB 7RWW · PDBe 7RWW · UniProt P0ABE7

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