MolNFT v1 · #186917 · protein
Structure of the human GIGYF1-TNRC6C complex
7RUQ · GRB10-interacting gyf protein 1: “Structure of the human GIGYF1-TNRC6C complex”. X-ray diffraction. MolNFT v1 #186917 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RUQ
- Type
- protein
- Length
- 142 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- GRB10-interacting gyf protein 1; Trinucleotide repeat-containing gene 6C protein
- UniProt
- O75420, Q9HCJ0
Structure
x-ray diffraction · 4 distinct chains · 25% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GRB10-interacting gyf protein 1 | protein | 63 | 29% helix, 29% strand | O75420 |
| C | GRB10-interacting gyf protein 1 | protein | 62 | 27% helix, 29% strand | O75420 |
| D | Trinucleotide repeat-containing gene 6C protein | protein | 9 | 0% helix, 0% strand | Q9HCJ0 |
| B | Trinucleotide repeat-containing gene 6C protein | protein | 8 | 0% helix, 0% strand | Q9HCJ0 |
Interfaces
4 interfaces between chains.
- A–C · 444 Ų buried · 6 hydrogen bonds · protein-protein
- C–D · 363 Ų buried · 5 hydrogen bonds · protein-protein
- A–B · 313 Ų buried · 3 hydrogen bonds · protein-protein
- A–D · 84 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (nonstandard).
Compared structures
- 7RUQ · Structure of the human GIGYF1-TNRC6C complex · the same entry in another collection · chain B against B, TM-score 1.00
- O75420 · AlphaFold monomer V2.0 prediction for GRB10-interacting gyf protein 1 (O75420) · a predicted model of the same protein · chain C against A, TM-score 0.92
- Q9HCJ0 · AlphaFold monomer V2.0 prediction for trinucleotide repeat-containing gene 6C protein… · a predicted model of the same protein · chain B against A, TM-score 0.48
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O75420
- Every structure of UniProt Q9HCJ0
- Elsewhere: RCSB PDB 7RUQ · PDBe 7RUQ · UniProt O75420 · UniProt Q9HCJ0
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