MolNFT v1 · #186867 · protein
1.80 a resolution structure of mao from P. nicotinovorans in complex with FAD
7RT0 · 4-methylaminobutanoate oxidase (methylamine-forming): “1.80 a resolution structure of mao from P. nicotinovorans in complex with FAD”. X-ray diffraction, 1 ligand (FAD), 2 pockets (best druggability 0.78). MolNFT v1 #186867 on…
- PDB
- 7RT0
- Type
- protein
- Length
- 385 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 4-methylaminobutanoate oxidase (methylamine-forming)
- EC
- 1.5.3.21
- UniProt
- Q8GAJ0
- Ligands
- FAD
- Pockets
- 2 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-methylaminobutanoate oxidase (methylamine-forming) (EC 1.5.3.21) | protein | 385 | 34% helix, 26% strand | Q8GAJ0 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 711 | 0.78 | 0.82 | 73 | FAD |
| 2 | 57 | 0.56 | 0.90 | 17 | empty |
Compared structures
- 7RT0 · 1.80 A resolution structure of MAO from P. nicotinovorans in complex with FAD · the same entry in another collection · chain A against A, TM-score 1.00
- Q8GAJ0 · AlphaFold monomer V2.0 prediction for 4-methylaminobutanoate oxidase… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GAJ0
- Elsewhere: RCSB PDB 7RT0 · PDBe 7RT0 · UniProt Q8GAJ0
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