MolNFT v1 · #186605 · protein
Complex III2 from candida albicans, inhibitor free, rieske head domain in C position
7RJD: “Complex III2 from candida albicans, inhibitor free, rieske head domain in C position”. Electron microscopy, 4 ligands (HEM, U10, FES). MolNFT v1 #186605 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RJD
- Type
- protein
- Length
- 1,912 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1D8PJX3, A0A1D8PP59, P0C8L0, A0A1D8PHA3, Q5ABS1, A0A1D8PHA2, A0A1D8PJT8, A0A1D8PLP3, P83782
- Ligands
- HEM, U10, FES, HEC
Structure
electron microscopy · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 137 | — | A0A1D8PJX3 |
| A | — | protein | 416 | — | A0A1D8PP59 |
| K | — | protein | 383 | — | P0C8L0 |
| D | — | protein | 244 | — | A0A1D8PHA3 |
| G | — | protein | 122 | — | Q5ABS1 |
| F | — | protein | 85 | — | A0A1D8PHA2 |
| H | — | protein | 72 | — | A0A1D8PJT8 |
| I | — | protein | 39 | — | A0A1D8PLP3 |
| B | — | protein | 364 | — | P83782 |
| M | — | protein | 50 | — | A0A1D8PJX3 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains K
- U10 · Ubiquinone-10 · ligand · 2 copies · chains K
- FES · Fe2/s2 (inorganic) cluster · ligand · chains E
- HEC · Heme C · ligand · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RJD · Complex III2 from Candida albicans, inhibitor free, Rieske head domain in c position · the same entry in another collection · chain M against M, TM-score 1.00
- P0C8L0 · AlphaFold monomer V2.0 prediction for cytochrome B (P0C8L0) · a predicted model of the same protein · chain K against A, TM-score 0.99
- P83782 · AlphaFold monomer V2.0 prediction for cytochrome B-C1 complex subunit 2, mitochondrial… · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1D8PJX3
- Every structure of UniProt A0A1D8PP59
- Every structure of UniProt P0C8L0
- Every structure of UniProt A0A1D8PHA3
- Every structure of UniProt Q5ABS1
- Every structure of UniProt A0A1D8PHA2
- Every structure of UniProt A0A1D8PJT8
- Every structure of UniProt A0A1D8PLP3
- Every structure of UniProt P83782
- Elsewhere: RCSB PDB 7RJD · PDBe 7RJD · UniProt A0A1D8PJX3 · UniProt A0A1D8PP59 · UniProt P0C8L0 · UniProt A0A1D8PHA3 · UniProt Q5ABS1 · UniProt A0A1D8PHA2 · UniProt A0A1D8PJT8 · UniProt A0A1D8PLP3 · UniProt P83782
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