MolNFT v1 · #18610 · protein

Structure of B. subtilis ylqf GTPase

1PUJ · Conserved hypothetical protein ylqf: “Structure of B. subtilis ylqf GTPase”. X-ray diffraction, 2 ligands (GNP, MG). MolNFT v1 #18610 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1PUJ
Type: protein
Length: 261 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Conserved hypothetical protein ylqf
UniProt: O31743
Ligands: GNP, MG

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Conserved hypothetical protein ylqf	protein	261	46% helix, 13% strand	O31743

Ligands and binding sites

GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · chains A
MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

1PUJ · Structure of B. subtilis YlqF GTPase · the same entry in another collection · chain A against A, TM-score 1.00
O31743 · AlphaFold monomer V2.0 prediction for ribosome biogenesis GTPase a (O31743) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O31743
Elsewhere: RCSB PDB 1PUJ · PDBe 1PUJ · UniProt O31743

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