MolNFT v1 · #185537 · protein

Zn-free structure of lipocalin-like milk protein, inspired from diploptera punctata, expressed in saccharomyces cerevisiae

7Q02: “Zn-free structure of lipocalin-like milk protein, inspired from diploptera punctata, expressed in…”. X-ray diffraction, 1 ligand (PAM), 1 pocket (best druggability 0.80). MolNFT v1 #185537 on GenesisL1: 3D structure, binding sites…

PDB: 7Q02
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Milk protein
UniProt: Q6SVB5
Ligands: PAM
Pockets: 1 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Milk protein	protein	153	10% helix, 46% strand	Q6SVB5

Ligands and binding sites

PAM · Palmitoleic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	186	0.80	0.94	31	PAM

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

7Q02 · Zn-free structure of lipocalin-like Milk protein, inspired from Diploptera punctata… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6SVB5
Elsewhere: RCSB PDB 7Q02 · PDBe 7Q02 · UniProt Q6SVB5

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