MolNFT v1 · #185256 · protein

Cryo-EM structure of the actomyosin-V complex in the post-rigor transition state (appnhp, central 3ER/2ER)

7PME: “Cryo-EM structure of the actomyosin-V complex in the post-rigor transition state (appnhp, central 3ER/2ER)”. Electron microscopy, 3 ligands (ADP, ANP, MG). MolNFT v1 #185256 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 7PME
Type: protein
Length: 2,909 residues
Chains: 10
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q02440, P14649, P68135
Ligands: ADP, ANP, MG

Structure

electron microscopy · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, D	—	protein	747	—	Q02440
B, E	—	protein	139	—	P14649
C, F, G	—	protein	372	—	P68135
H, I, J	—	protein	7	—	—

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains C, F, G
ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, D
MG · Magnesium ion · metal · 7 copies · chains A, C, D, G

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7PME · Cryo-EM structure of the actomyosin-V complex in the post-rigor transition state (AppNHp… · the same entry in another collection · chain J against J, TM-score 1.00
P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain G against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q02440
Every structure of UniProt P14649
Every structure of UniProt P68135
Elsewhere: RCSB PDB 7PME · PDBe 7PME · UniProt Q02440 · UniProt P14649 · UniProt P68135

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