MolNFT v1 · #185241 · protein
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 3ER/2ER, young jasp-stabilized F-actin)
7PLZ: “Cryo-EM structure of the actomyosin-V complex in the rigor state (central 3ER/2ER, young jasp-stabilized…”. Electron microscopy, 4 ligands (ADP, 9UE, MG). MolNFT v1 #185241 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7PLZ
- Type
- protein
- Length
- 2,887 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q02440, P68135, P14649
- Ligands
- ADP, 9UE, MG, PO4
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 748 | — | Q02440 |
| C, F, G | — | protein | 371 | — | P68135 |
| B, E | — | protein | 139 | — | P14649 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains C, F, G
- 9UE · Jasplakinolide · ligand · 3 copies · chains C, F, G
- MG · Magnesium ion · metal · 3 copies · chains C, F, G
- PO4 · Phosphate ion · ion · 3 copies · chains C, F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PLZ · Cryo-EM structure of the actomyosin-V complex in the rigor state (central 3er/2er, young… · the same entry in another collection · chain G against G, TM-score 1.00
- P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain C against A, TM-score 0.96
- Q02440 · AlphaFold monomer V2.0 prediction for unconventional myosin-va (Q02440) · a predicted model of the same protein · chain A against A, TM-score 0.95
- P14649 · AlphaFold monomer V2.0 prediction for myosin light chain 6B (P14649) · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02440
- Every structure of UniProt P68135
- Every structure of UniProt P14649
- Elsewhere: RCSB PDB 7PLZ · PDBe 7PLZ · UniProt Q02440 · UniProt P68135 · UniProt P14649
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