MolNFT v1 · #18476 · protein

Trypsin at 0.8 a, PH5 / borax

1PQ7: “Trypsin at 0.8 a, PH5 / borax”. X-ray diffraction, 2 ligands (ARG, SO4). MolNFT v1 #18476 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1PQ7
Type: protein
Length: 224 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Trypsin
EC: 3.4.21.4
UniProt: P35049
Ligands: ARG, SO4

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trypsin (EC 3.4.21.4)	protein	224	10% helix, 37% strand	P35049

Ligands and binding sites

ARG · Arginine · ligand · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1PQ7 · Trypsin at 0.8 A, pH5 / borax · the same entry in another collection · chain A against A, TM-score 1.00
P35049 · AlphaFold monomer V2.0 prediction for trypsin (P35049) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P35049
Elsewhere: RCSB PDB 1PQ7 · PDBe 1PQ7 · UniProt P35049

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