MolNFT v1 · #184730 · protein
Mitoneet bound to M1 molecule
7P0O · Cdgsh iron-sulfur domain-containing protein 1: “Mitoneet bound to M1 molecule”. X-ray diffraction, 3 ligands (FES, 49I, 4OY). MolNFT v1 #184730 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7P0O
- Type
- protein
- Length
- 132 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cdgsh iron-sulfur domain-containing protein 1
- UniProt
- Q9NZ45
- Ligands
- FES, 49I, 4OY
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cdgsh iron-sulfur domain-containing protein 1 | protein | 66 | 18% helix, 24% strand | Q9NZ45 |
| B | Cdgsh iron-sulfur domain-containing protein 1 | protein | 66 | 18% helix, 23% strand | Q9NZ45 |
Ligands and binding sites
- FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains A, B
- 49I · 2-benzamido-4-[(2~{R})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid · ligand · chains A, B
- 4OY · 2-benzamido-4-[(2~{S})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 2078 Ų buried · 51 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZ45
- Elsewhere: RCSB PDB 7P0O · PDBe 7P0O · UniProt Q9NZ45
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