MolNFT v1 · #184701 · protein + RNA
Crystal structure of archaeal L7AE bound to eukaryotic kink-loop
7OZQ: “Crystal structure of archaeal L7AE bound to eukaryotic kink-loop”. X-ray diffraction, 3 ligands (NA, CA, CL). MolNFT v1 #184701 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OZQ
- Type
- protein + RNA
- Length
- 616 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8U160
- Ligands
- NA, CA, CL
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 123 | — | Q8U160 |
| B | — | protein | 122 | — | Q8U160 |
| D | — | protein | 121 | — | Q8U160 |
| E, G, H | — | rna | 32 | — | — |
| F | — | rna | 31 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · 6 copies · chains E, F, G
- CA · Calcium ion · metal · 3 copies · chains E, F
- CL · Chloride ion · ion · chains H
- ACT · Acetate ion · additive · 5 copies · chains B, G, E, F, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OZQ · Crystal structure of archaeal L7Ae bound to eukaryotic kink-loop · the same entry in another collection · chain C against C, TM-score 1.00
- Q8U160 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L7AE (Q8U160) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8U160
- Elsewhere: RCSB PDB 7OZQ · PDBe 7OZQ · UniProt Q8U160
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