MolNFT v1 · #184482 · protein + RNA
La crosse virus polymerase in transcription mode with cleaved capped RNA entering the polymerase active site
7ORK: “La crosse virus polymerase in transcription mode with cleaved capped RNA entering the polymerase active site”. Electron microscopy, 4 ligands (GTG, ATP, MG). MolNFT v1 #184482 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7ORK
- Type
- protein + RNA
- Length
- 2,218 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A5HC98
- Ligands
- GTG, ATP, MG, ZN
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 2182 | — | A5HC98 |
| H | — | rna | 17 | — | — |
| T | — | rna | 18 | — | — |
| P | — | rna | 1 | — | — |
Ligands and binding sites
- GTG · 7-methyl-guanosine-5'-triphosphate-5'-guanosine · ligand · chains A, P
- ATP · Adenosine-5'-triphosphate · ligand · chains A, T
- MG · Magnesium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ORK · La Crosse virus polymerase in transcription mode with cleaved capped RNA entering the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5HC98
- Elsewhere: RCSB PDB 7ORK · PDBe 7ORK · UniProt A5HC98
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