MolNFT v1 · #184469 · protein
Ternary complex of 14-3-3 sigma, NOTCHPS1917 phosphopeptide, and WQ162
7OR5 · 14-3-3 protein sigma: “Ternary complex of 14-3-3 sigma, NOTCHPS1917 phosphopeptide, and WQ162”. X-ray diffraction, 2 ligands (09W, CL), 1 pocket (best druggability 0.53). MolNFT v1 #184469 on GenesisL1: 3D structure, binding sites…
- PDB
- 7OR5
- Type
- protein
- Length
- 237 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 14-3-3 protein sigma; Neurogenic locus notch homolog protein 4
- UniProt
- P31947, Q99466
- Ligands
- 09W, CL
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 2 distinct chains · 79% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 14-3-3 protein sigma | protein | 230 | 82% helix, 0% strand | P31947 |
| B | Neurogenic locus notch homolog protein 4 | protein | 7 | 0% helix, 0% strand | Q99466 |
Ligands and binding sites
- 09W · ~{N}-[(5-carbamimidoyl-3-phenyl-thiophen-2-yl)methyl]-2,3-dihydro-1-benzofuran-7-carboxamide · ligand · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.53 | 0.79 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 493 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (oxidation, phosphorylation).
Compared structures
- 7OR5 · Ternary complex of 14-3-3 sigma, NotchpS1917 phosphopeptide, and WQ162 · the same entry in another collection · chain A against A, TM-score 1.00
- P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q99466 · AlphaFold monomer V2.0 prediction for neurogenic locus notch homolog protein 4 (Q99466) · a predicted model of the same protein · chain B against A, TM-score 0.54
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31947
- Every structure of UniProt Q99466
- Elsewhere: RCSB PDB 7OR5 · PDBe 7OR5 · UniProt P31947 · UniProt Q99466
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