MolNFT v1 · #184409 · protein
Purine nucleoside PHOSPHORYLASE(DEOD-type) from H. pylori with 2,6- dichloropurine
7OP9: “Purine nucleoside PHOSPHORYLASE(DEOD-type) from H. pylori with 2,6- dichloropurine”. X-ray diffraction, 2 ligands (06K, MG). MolNFT v1 #184409 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OP9
- Type
- protein
- Length
- 2,796 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P56463
- Ligands
- 06K, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J, K, L | — | protein | 233 | — | P56463 |
Ligands and binding sites
- 06K · 2,6-bis(chloranyl)-7H-purine · ligand · 12 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- MG · Magnesium ion · metal · 12 copies · chains A, D, B, E, C, F, G, J, H, K, I, L
- IMD · Imidazole · additive · 13 copies · chains A, D, B, E, C, F, G, J, H, K, I, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OP9 · Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 2,6-dichloropurine · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56463
- Elsewhere: RCSB PDB 7OP9 · PDBe 7OP9 · UniProt P56463
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