MolNFT v1 · #184403 · protein
CHADOX1/ chimpanzee adenovirus Y25 fiber knob protein
7OP2: “CHADOX1/ chimpanzee adenovirus Y25 fiber knob protein”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #184403 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OP2
- Type
- protein
- Length
- 2,216 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G9G864
- Ligands
- CA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D, E, F, G, I, J | — | protein | 187 | — | G9G864 |
| B, H | — | protein | 181 | — | G9G864 |
| C | — | protein | 184 | — | G9G864 |
| K | — | protein | 182 | — | G9G864 |
| L | — | protein | 179 | — | G9G864 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A, D, G
- EDO · 1,2-ethanediol · additive · 19 copies · chains A, B, C, D, F, E, G, I, H, J, K, L
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OP2 · Chadox1/ Chimpanzee adenovirus Y25 fiber knob protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G9G864
- Elsewhere: RCSB PDB 7OP2 · PDBe 7OP2 · UniProt G9G864
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