MolNFT v1 · #184327 · protein + RNA
Thosea asigna virus rdrp domain elongation complex
7OMA: “Thosea asigna virus rdrp domain elongation complex”. X-ray diffraction, 2 ligands (POP, MG). MolNFT v1 #184327 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OMA
- Type
- protein + RNA
- Length
- 2,576 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6A562
- Ligands
- POP, MG
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 628 | — | Q6A562 |
| A | — | protein | 629 | — | Q6A562 |
| C | — | protein | 629 | — | Q6A562 |
| D | — | protein | 630 | — | Q6A562 |
| E, G, I, L | — | rna | 7 | — | — |
| F, H, J, K | — | rna | 8 | — | — |
Ligands and binding sites
- POP · Pyrophosphate 2- · ligand · 3 copies · chains B, G, A, E, C, I
- MG · Magnesium ion · metal · 5 copies · chains B, G, A, E, D, L, C, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OMA · Thosea asigna virus RdRP domain elongation complex · the same entry in another collection · chain K against K, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6A562
- Elsewhere: RCSB PDB 7OMA · PDBe 7OMA · UniProt Q6A562
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