MolNFT v1 · #18424 · protein

Thermostable phytase from bacillus sp

1POO · Protein (phytase): “Thermostable phytase from bacillus sp”. X-ray diffraction, 1 ligand (CA), 2 pockets (best druggability 0.82). MolNFT v1 #18424 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1POO
Type: protein
Length: 353 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (phytase)
EC: 3.1.3.8
UniProt: O66037
Ligands: CA
Pockets: 2 · best druggability 0.82

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (phytase) (EC 3.1.3.8)	protein	353	5% helix, 48% strand	O66037

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	226	0.82	0.95	44	CA
2	80	0.31	0.73	20	empty

Compared structures

1POO · Thermostable phytase from bacillus sp · the same entry in another collection · chain A against A, TM-score 1.00
O66037 · AlphaFold monomer V2.0 prediction for 3-phytase (O66037) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O66037
Elsewhere: RCSB PDB 1POO · PDBe 1POO · UniProt O66037

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