MolNFT v1 · #183998 · RNA
Crystal structure of chili RNA aptamer in complex with dmhbo+ (iridium hexammine co-crystallized form)
7OA3: “Crystal structure of chili RNA aptamer in complex with dmhbo+ (iridium hexammine co-crystallized form)”. X-ray diffraction, 4 ligands (V5Z, IR, K). MolNFT v1 #183998 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OA3
- Type
- RNA
- Length
- 104 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- V5Z, IR, K, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | rna | 52 | — | — |
Ligands and binding sites
- V5Z · Dmhbo+ · ligand · 2 copies · chains A, B
- IR · Iridium ion · metal · 5 copies · chains A, B
- K · Potassium ion · metal · 4 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OA3 · Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine… · the same entry in another collection · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7OA3 · PDBe 7OA3
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