MolNFT v1 · #183536 · protein
The structure of rrm domain of human TRMT2A at 1.23 a resolution
7NTO · TRNA (uracil-5-)-methyltransferase homolog a: “The structure of rrm domain of human TRMT2A at 1.23 a resolution”. X-ray diffraction, 3 ligands (NA, SO4, CL). MolNFT v1 #183536 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7NTO
- Type
- protein
- Length
- 78 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TRNA (uracil-5-)-methyltransferase homolog a
- EC
- 2.1.1.-
- UniProt
- Q8IZ69
- Ligands
- NA, SO4, CL
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA (uracil-5-)-methyltransferase homolog a (EC 2.1.1.-) | protein | 78 | 27% helix, 29% strand | Q8IZ69 |
Ligands and binding sites
- NA · Sodium ion · metal · 6 copies · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A
- CL · Chloride ion · ion · 4 copies · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NTO · The structure of RRM domain of human TRMT2A at 1.23 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
- Q8IZ69 · AlphaFold monomer V2.0 prediction for tRNA (uracil-5-)-methyltransferase homolog a… · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IZ69
- Elsewhere: RCSB PDB 7NTO · PDBe 7NTO · UniProt Q8IZ69
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