MolNFT v1 · #183518 · protein
X-ray structure of SCOV2-plpro in complex with small molecule inhibitor
7NT4: “X-ray structure of SCOV2-plpro in complex with small molecule inhibitor”. X-ray diffraction, 3 ligands (PRL, ZN, SO4). MolNFT v1 #183518 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NT4
- Type
- protein
- Length
- 621 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- PRL, ZN, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 308 | — | P0DTD1 |
| B | — | protein | 313 | — | P0DTD1 |
Ligands and binding sites
- PRL · Proflavin · ligand · 6 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 5 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NT4 · X-ray structure of SCoV2-PLpro in complex with small molecule inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7NT4 · PDBe 7NT4 · UniProt P0DTD1
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