MolNFT v1 · #183432 · protein

Vibiro cholerae PARA2

7NPD · Walker a-type ATPase: “Vibiro cholerae PARA2”. X-ray diffraction, 6 pockets (best druggability 0.59). MolNFT v1 #183432 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7NPD
Type: protein
Length: 387 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Walker a-type ATPase
UniProt: A0A085S0Z4
Pockets: 6 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Walker a-type ATPase	protein	387	45% helix, 11% strand	A0A085S0Z4

Pockets

6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	137	0.59	0.84	19	empty
2	67	0.48	0.83	20	empty
3	80	0.46	0.81	14	empty
4	104	0.43	0.78	18	empty
5	75	0.34	0.76	17	empty

Compared structures

7NPD · Vibiro cholerae ParA2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A085S0Z4
Elsewhere: RCSB PDB 7NPD · PDBe 7NPD · UniProt A0A085S0Z4

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