Research workbench
Vibiro cholerae PARA2
Analyse Vibiro cholerae PARA2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7NPD
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Walker a-type ATPase
- UniProt
- A0A085S0Z4
- Pockets
- 6 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Walker a-type ATPase | protein | 387 | 45% helix, 11% strand | A0A085S0Z4 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 137 | 0.59 | 0.84 | 19 | empty |
| 2 | 67 | 0.48 | 0.83 | 20 | empty |
| 3 | 80 | 0.46 | 0.81 | 14 | empty |
| 4 | 104 | 0.43 | 0.78 | 18 | empty |
| 5 | 75 | 0.34 | 0.76 | 17 | empty |
Compared structures
- 7NPD · Vibiro cholerae ParA2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A085S0Z4
- Elsewhere: RCSB PDB 7NPD · PDBe 7NPD · UniProt A0A085S0Z4
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