MolNFT v1 · #183257 · protein
Mycobacterium smegmatis ATP synthase state 3B
7NJR: “Mycobacterium smegmatis ATP synthase state 3B”. Electron microscopy, 3 ligands (ATP, ADP, MG). MolNFT v1 #183257 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NJR
- Type
- protein
- Length
- 4,930 residues
- Chains
- 20
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0R202, A0R200, A0R201, A0R1Z9, A0R205, A0R206, A0R204, A0R203
- Ligands
- ATP, ADP, MG
Structure
electron microscopy · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 511 | — | A0R202 |
| B | — | protein | 505 | — | A0R202 |
| C | — | protein | 521 | — | A0R202 |
| D, F | — | protein | 468 | — | A0R200 |
| E | — | protein | 464 | — | A0R200 |
| G | — | protein | 297 | — | A0R201 |
| H | — | protein | 118 | — | A0R1Z9 |
| L, M, N, O, Q, R, S, T | — | protein | 84 | — | A0R205 |
| P | — | protein | 85 | — | A0R205 |
| a | — | protein | 238 | — | A0R206 |
| b | — | protein | 145 | — | A0R204 |
| d | — | protein | 438 | — | A0R203 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 4 copies · chains A, D, B, E, C, F
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains C, D, E
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NJR · Mycobacterium smegmatis ATP synthase state 3b · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0R202
- Every structure of UniProt A0R200
- Every structure of UniProt A0R201
- Every structure of UniProt A0R1Z9
- Every structure of UniProt A0R205
- Every structure of UniProt A0R206
- Every structure of UniProt A0R204
- Every structure of UniProt A0R203
- Elsewhere: RCSB PDB 7NJR · PDBe 7NJR · UniProt A0R202 · UniProt A0R200 · UniProt A0R201 · UniProt A0R1Z9 · UniProt A0R205 · UniProt A0R206 · UniProt A0R204 · UniProt A0R203
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