MolNFT v1 · #183066 · protein
X-ray structure of acetylcholine-binding protein (achbp) in complex with FL001888.
7NDV: “X-ray structure of acetylcholine-binding protein (achbp) in complex with FL001888.”. X-ray diffraction, 3 ligands (U8Q, NAG, SO4). MolNFT v1 #183066 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7NDV
- Type
- protein
- Length
- 2,041 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P58154
- Ligands
- U8Q, NAG, SO4
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 202 | — | P58154 |
| B | — | protein | 205 | — | P58154 |
| C | — | protein | 201 | — | P58154 |
| D, I | — | protein | 203 | — | P58154 |
| E | — | protein | 200 | — | P58154 |
| F | — | protein | 204 | — | P58154 |
| G | — | protein | 210 | — | P58154 |
| H | — | protein | 212 | — | P58154 |
| J | — | protein | 201 | — | P58154 |
Ligands and binding sites
- U8Q · 4-[4-(trifluoromethyl)phenoxy]piperidine · ligand · 9 copies · chains A, B, C, D, E, F, G, J, H, I
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A, B, H, C, G, D, F
- SO4 · Sulfate ion · ion · 4 copies · chains D, E, G, H, I, F, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7NDV · X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL001888. · the same entry in another collection · chain H against H, TM-score 1.00
- P58154 · AlphaFold monomer V2.0 prediction for acetylcholine-binding protein (P58154) · a predicted model of the same protein · chain C against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P58154
- Elsewhere: RCSB PDB 7NDV · PDBe 7NDV · UniProt P58154
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