MolNFT v1 · #182908 · protein

The cryoem structure of lbpb from N. gonorrhoeae in complex with lactoferrin

7N88: “The cryoem structure of lbpb from N. gonorrhoeae in complex with lactoferrin”. Electron microscopy, 2 ligands (BCT, FE). MolNFT v1 #182908 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7N88
Type: protein
Length: 1,220 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9Z4N2, P02788
Ligands: BCT, FE

Structure

electron microscopy · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	532	—	Q9Z4N2
B	—	protein	688	—	P02788

Ligands and binding sites

BCT · Bicarbonate ion · ligand · 2 copies · chains B
FE · Fe (III) ion · metal · 2 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7N88 · The cryoEM structure of LbpB from N. gonorrhoeae in complex with lactoferrin · the same entry in another collection · chain A against A, TM-score 1.00
P02788 · AlphaFold monomer V2.0 prediction for lactotransferrin (P02788) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Z4N2
Every structure of UniProt P02788
Elsewhere: RCSB PDB 7N88 · PDBe 7N88 · UniProt Q9Z4N2 · UniProt P02788

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