MolNFT v1 · #182711 · protein
The von willebrand factor a domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone
7N1O · Transcription factor ETV6,ISOFORM 4 of anthrax toxin…: “The von willebrand factor a domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL…”. X-ray diffraction, 2 ligands (MG, CL), 1 pocket (best druggability…
- PDB
- 7N1O
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcription factor ETV6,ISOFORM 4 of anthrax toxin receptor 2
- UniProt
- P41212, P58335
- Ligands
- MG, CL
- Pockets
- 1 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor ETV6,ISOFORM 4 of anthrax toxin receptor 2 | protein | 257 | 50% helix, 16% strand | P41212, P58335 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 83 | 0.52 | 0.84 | 22 | empty |
Compared structures
- 7N1O · The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly… · the same entry in another collection · chain A against A, TM-score 1.00
- P58335 · AlphaFold monomer V2.0 prediction for anthrax toxin receptor 2 (P58335) · a predicted model of the same protein · chain A against A, TM-score 0.70
- P41212 · AlphaFold monomer V2.0 prediction for transcription factor ETV6 (P41212) · a predicted model of the same protein · chain A against A, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41212
- Every structure of UniProt P58335
- Elsewhere: RCSB PDB 7N1O · PDBe 7N1O · UniProt P41212 · UniProt P58335
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