MolNFT v1 · #182586 · protein
AB1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab
7MXE: “AB1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #182586 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7MXE
- Type
- protein
- Length
- 2,632 residues
- Chains
- 14
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2N0S6
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, H, M | — | protein | 132 | — | — |
| B, L, O | — | protein | 108 | — | — |
| C | — | protein | 124 | — | Q2N0S6 |
| D | — | protein | 122 | — | Q2N0S6 |
| F | — | protein | 99 | — | Q2N0S6 |
| G, J | — | protein | 442 | — | Q2N0S6 |
| P | — | protein | 438 | — | Q2N0S6 |
| R | — | protein | 129 | — | — |
| W | — | protein | 116 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 87 copies · chains C, O, D, L, B, F, A, G, J, H, P, M
- MAN · alpha-D-mannopyranose · sugar · 30 copies · chains G, H, A, M
- BMA · beta-D-mannopyranose · sugar · 11 copies · chains H, A, R, M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7MXE · Ab1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2N0S6
- Elsewhere: RCSB PDB 7MXE · PDBe 7MXE · UniProt Q2N0S6
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