MolNFT v1 · #182246 · protein
The MPP75AA1.1 beta-pore-forming protein from brevibacillus laterosporus
7ML9 · Insecticidal protein: “The MPP75AA1.1 beta-pore-forming protein from brevibacillus laterosporus”. X-ray diffraction, 2 ligands (SM, NA), 1 pocket (best druggability 0.47). MolNFT v1 #182246 on GenesisL1: 3D structure, binding sites…
- PDB
- 7ML9
- Type
- protein
- Length
- 295 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Insecticidal protein
- UniProt
- A0A249JQG5
- Ligands
- SM, NA
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 60% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Insecticidal protein | protein | 295 | 12% helix, 60% strand | A0A249JQG5 |
Ligands and binding sites
- SM · Samarium (III) ion · metal · 2 copies · chains A
- NA · Sodium ion · metal · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.47 | 0.81 | 21 | empty |
Compared structures
- 7ML9 · The Mpp75Aa1.1 beta-pore-forming protein from Brevibacillus laterosporus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A249JQG5
- Elsewhere: RCSB PDB 7ML9 · PDBe 7ML9 · UniProt A0A249JQG5
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