MolNFT v1 · #181828 · protein
6-deoxyerythronolide B synthase (debs) module 1 in complex with antibody fragment 1B2: state 1
7M7F: “6-deoxyerythronolide B synthase (debs) module 1 in complex with antibody fragment 1B2: state 1”. Electron microscopy, 1 ligand (PN7). MolNFT v1 #181828 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7M7F
- Type
- protein
- Length
- 3,211 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5UNP6, Q03133
- Ligands
- PN7
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 999 | — | Q5UNP6, Q03133 |
| A | — | protein | 1390 | — | Q5UNP6, Q03133 |
| C, E | — | protein | 205 | — | — |
| D | — | protein | 206 | — | — |
| F | — | protein | 206 | — | — |
Ligands and binding sites
- PN7 · N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy) butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide · ligand · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7M7F · 6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5UNP6
- Every structure of UniProt Q03133
- Elsewhere: RCSB PDB 7M7F · PDBe 7M7F · UniProt Q5UNP6 · UniProt Q03133
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