MHC-like protein complex structure

Structure

x-ray diffraction · 4 distinct chains.

Ligands and binding sites

• QOD · (3R)-N-[(2S,3R)-1-(alpha-D-galactopyranosyloxy)-3-hydroxy-15-methylhexadecan-2-yl]-3-hydroxyheptadecanamide · ligand · chains A, C
• HP6 · Heptane · ligand · chains A
• NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A
• BMA · beta-D-mannopyranose · sugar

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 7M72 · MHC-like protein complex structure · the same entry in another collection · chain A against A, TM-score 1.00
• P01887 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P01887) · a predicted model of the same protein · chain B against A, TM-score 0.98
• P11609 · AlphaFold monomer V2.0 prediction for antigen-presenting glycoprotein CD1D1 (P11609) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P11609
• Every structure of UniProt P01887
• Every structure of UniProt K7N5N2
• Every structure of UniProt K7N5M4
• Elsewhere: RCSB PDB 7M72 · PDBe 7M72 · UniProt P11609 · UniProt P01887 · UniProt K7N5N2 · UniProt K7N5M4