MolNFT v1 · #181549 · protein
Crystal structure of the elongation module of the bacillamide nrps, bmdb, in complex with the oxidase bmdc
7LY7: “Crystal structure of the elongation module of the bacillamide nrps, bmdb, in complex with the oxidase bmdc”. X-ray diffraction, 2 ligands (FMN, YOA). MolNFT v1 #181549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LY7
- Type
- protein
- Length
- 1,237 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- FMN, YOA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 329 | — | — |
| A | — | protein | 908 | — | — |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains B
- YOA · 5'-{[(2R,3S)-3-amino-2-({2-[(N-{(2R)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-4-sulfanylbutane-1-sulfonyl]amino}-5'-deoxyadenosine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LY7 · Crystal structure of the elongation module of the bacillamide NRPS, BmdB, in complex with… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7LY7 · PDBe 7LY7
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