GL1X · GenesisL1 explorer

Ligand · YOA

YOA · 5'-{[(2R,3S)-3-amino-2-({2-[(N-{(2R)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-4-sulfanylbutane-1-sulfonyl]amino}-5'-deoxyadenosine

YOA, 5'-{[(2R,3S)-3-amino-2-({2-[(N-{(2R)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-4-sulfanylbutane-1-sulfonyl]amino}-5'-deoxyadenosine (C25 H44 N9 O12 P S3, 789.8 g/mol), in the MolNFT…

Component
YOA
Formula
C25 H44 N9 O12 P S3
Class
ligand
Structures
2
PDB entries
1

Binding sites

YOA in 2 structures; the first of them:

  • 7LY7 · Crystal structure of the elongation module of the bacillamide NRPS, BmdB, in complex with… · YOA A1901 · binds SER1473, SER1474, PHE1477, LEU1479, ARG1501, VAL1521, ILE1524, SER1547 and 15 more
  • 7LY7 · Crystal structure of the elongation module of the bacillamide nrps, bmdb, in complex with… · YOA A1901 · binds SER1473, SER1474, PHE1477, LEU1479, ARG1501, VAL1521, ILE1524, SER1547 and 15 more

Residues it binds most

SER 2, GLY 2, ILE 2, ARG 2, ASP 2, LEU 2, PHE 2, ALA 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide

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