MolNFT v1 · #181507 · protein
Apo structure of vibrio cholerae dgtpase protein VC1979
7LWZ: “Apo structure of vibrio cholerae dgtpase protein VC1979”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #181507 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LWZ
- Type
- protein
- Length
- 2,340 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KQL9
- Ligands
- NI
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 385 | — | Q9KQL9 |
| A | — | protein | 400 | — | Q9KQL9 |
| D | — | protein | 392 | — | Q9KQL9 |
| C | — | protein | 390 | — | Q9KQL9 |
| F | — | protein | 373 | — | Q9KQL9 |
| E | — | protein | 400 | — | Q9KQL9 |
Ligands and binding sites
- NI · Nickel (II) ion · metal · 6 copies · chains B, A, D, C, F, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LWZ · Apo Structure of Vibrio cholerae dGTPase protein VC1979 · the same entry in another collection · chain E against E, TM-score 1.00
- Q9KQL9 · AlphaFold monomer V2.0 prediction for deoxyguanosinetriphosphate triphosphohydrolase-like… · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KQL9
- Elsewhere: RCSB PDB 7LWZ · PDBe 7LWZ · UniProt Q9KQL9
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