MolNFT v1 · #181463 · protein
Cryptococcus neoformans air synthetase
7LVP · Air synthase: “Cryptococcus neoformans air synthetase”. X-ray diffraction, 2 ligands (GLY, PO4), 1 pocket (best druggability 0.34). MolNFT v1 #181463 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LVP
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Air synthase
- EC
- 6.3.3.1
- UniProt
- J9VYP5
- Ligands
- GLY, PO4
- Pockets
- 1 · best druggability 0.34
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Air synthase (EC 6.3.3.1) | protein | 285 | 37% helix, 22% strand | J9VYP5 |
Ligands and binding sites
- GLY · Glycine · ligand · chains A
- PO4 · Phosphate ion · ion · 2 copies · chains A
- EDO · 1,2-ethanediol · additive · 3 copies · chains A
- SIN · Succinic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 80 | 0.34 | 0.75 | 13 | empty |
Compared structures
- 7LVP · Cryptococcus neoformans AIR synthetase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9VYP5
- Elsewhere: RCSB PDB 7LVP · PDBe 7LVP · UniProt J9VYP5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.