MolNFT v1 · #181296 · protein

Crystal structure of the R375D mutant of leut

7LQL · NA(+):NEUROTRANSMITTER symporter (snf family): “Crystal structure of the R375D mutant of leut”. X-ray diffraction, 2 ligands (ALA, NA), 4 pockets (best druggability 0.71). MolNFT v1 #181296 on GenesisL1: 3D structure, binding sites…

PDB: 7LQL
Type: protein
Length: 501 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NA(+):NEUROTRANSMITTER symporter (snf family)
UniProt: O67854
Ligands: ALA, NA
Pockets: 4 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NA(+):NEUROTRANSMITTER symporter (snf family)	protein	501	78% helix, 1% strand	O67854

Ligands and binding sites

ALA · Alanine · ligand · chains A
NA · Sodium ion · metal · 2 copies · chains A
BOG · octyl beta-D-glucopyranoside · additive · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	632	0.71	0.79	56	empty
2	63	0.41	0.80	13	empty
3	50	0.35	0.79	16	empty
4	82	0.35	0.74	13	empty

Compared structures

7LQL · Crystal structure of the R375D mutant of LeuT · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O67854
Elsewhere: RCSB PDB 7LQL · PDBe 7LQL · UniProt O67854

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