MolNFT v1 · #181261 · protein + DNA
APE1 mn-bound product complex with abasic ribonucleotide DNA
7LPH: “APE1 mn-bound product complex with abasic ribonucleotide DNA”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #181261 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LPH
- Type
- protein + DNA
- Length
- 586 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P27695
- Ligands
- MN
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 273 | — | P27695 |
| C | — | dna | 21 | — | — |
| D | — | protein | 271 | — | P27695 |
| E | — | dna | 10 | — | — |
| A | — | dna | 11 | — | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · chains D, E, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LPH · APE1 Mn-bound product complex with abasic ribonucleotide DNA · the same entry in another collection · chain C against C, TM-score 1.00
- P27695 · AlphaFold monomer V2.0 prediction for DNA-(apurinic or apyrimidinic site) endonuclease… · a predicted model of the same protein · chain D against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P27695
- Elsewhere: RCSB PDB 7LPH · PDBe 7LPH · UniProt P27695
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.