MolNFT v1 · #180945 · protein + DNA

Pyrococcus RNA ligase

7LFQ: “Pyrococcus RNA ligase”. X-ray diffraction, 2 ligands (K, SO4). MolNFT v1 #180945 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7LFQ
Type: protein + DNA
Length: 487 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: O59245
Ligands: K, SO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	481	—	O59245
B	—	dna	6	—	—

Ligands and binding sites

K · Potassium ion · metal · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7LFQ · Pyrococcus RNA ligase · the same entry in another collection · chain A against A, TM-score 1.00
O59245 · AlphaFold monomer V2.0 prediction for RNA-splicing ligase rtcb (O59245) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O59245
Elsewhere: RCSB PDB 7LFQ · PDBe 7LFQ · UniProt O59245

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.