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MolNFT v1 · #180813 · protein + DNA

Crystal structure of tfam (mitochondrial transcription factor a) bridging two non-sequence specific DNA substrates

7LBW: “Crystal structure of tfam (mitochondrial transcription factor a) bridging two non-sequence specific DNA…”. X-ray diffraction. MolNFT v1 #180813 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7LBW
Type
protein + DNA
Length
471 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q00059

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein193—Q00059
B—protein190—Q00059
C, E—dna22——
D, F—dna22——

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · 6 copies · chains A, B, C
  • PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7LBW · Crystal structure of TFAM (mitochondrial transcription factor A) bridging two… · the same entry in another collection · chain F against F, TM-score 1.00
  • Q00059 · AlphaFold monomer V2.0 prediction for transcription factor a, mitochondrial (Q00059) · a predicted model of the same protein · chain A against A, TM-score 0.97

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