MolNFT v1 · #180708 · protein
Diadenylate cyclase with AMP from streptococcus mutans
7L8N: “Diadenylate cyclase with AMP from streptococcus mutans”. X-ray diffraction, 2 ligands (AMP, CL). MolNFT v1 #180708 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7L8N
- Type
- protein
- Length
- 301 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Diadenylate cyclase
- EC
- 2.7.7.85
- UniProt
- Q8DTC4
- Ligands
- AMP, CL
Structure
x-ray diffraction · 2 distinct chains · 37% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Diadenylate cyclase (EC 2.7.7.85) | protein | 151 | 36% helix, 26% strand | Q8DTC4 |
| B | Diadenylate cyclase (EC 2.7.7.85) | protein | 150 | 38% helix, 26% strand | Q8DTC4 |
Ligands and binding sites
- AMP · Adenosine monophosphate · ligand · chains A
- CL · Chloride ion · ion · 2 copies · chains B
- ACT · Acetate ion · additive · 2 copies · chains A
- MLI · Malonate ion · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 778 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 7L8N · Diadenylate cyclase with AMP from Streptococcus mutans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DTC4
- Elsewhere: RCSB PDB 7L8N · PDBe 7L8N · UniProt Q8DTC4
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