MolNFT v1 · #180512 · protein
HIV integrase core domain in complex with inhibitor 2-(5-(3- fluorophenyl)-2-(2-(thiophen-2-YL)ETHYNYL)-1- benzofuran-3-yl) ethanoic acid
7L23: “HIV integrase core domain in complex with inhibitor 2-(5-(3- fluorophenyl)-2-(2-(thiophen-2-YL)ETHYNYL)-1…”. X-ray diffraction, 3 ligands (XFS, IOD, SO4). MolNFT v1 #180512 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7L23
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Integrase
- UniProt
- Q76353
- Ligands
- XFS, IOD, SO4
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrase | protein | 137 | 49% helix, 24% strand | Q76353 |
Ligands and binding sites
- XFS · 3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}benzoic acid · ligand · chains A
- IOD · Iodide ion · ion · 5 copies · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7L23 · HIV Integrase core domain in complex with inhibitor… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q76353
- Elsewhere: RCSB PDB 7L23 · PDBe 7L23 · UniProt Q76353
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