MolNFT v1 · #180486 · protein
Crystal structure of sugar-bound melibiose permease melb
7L17 · Melibiose carrier protein: “Crystal structure of sugar-bound melibiose permease melb”. X-ray diffraction, 1 ligand (9PG), 2 pockets (best druggability 0.83). MolNFT v1 #180486 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7L17
- Type
- protein
- Length
- 453 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Melibiose carrier protein
- UniProt
- P30878
- Ligands
- 9PG
- Pockets
- 2 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 81% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Melibiose carrier protein | protein | 453 | 81% helix, 0% strand | P30878 |
Ligands and binding sites
- 9PG · 4-nitrophenyl alpha-D-galactopyranoside · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1170 | 0.83 | 0.83 | 73 | 9PG |
| 2 | 93 | 0.69 | 0.92 | 24 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P30878
- Elsewhere: RCSB PDB 7L17 · PDBe 7L17 · UniProt P30878
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