MolNFT v1 · #180397 · protein
Structure of the S. cerevisiae phosphatidylcholine flippase DNF1-LEM3 complex in the apo E1 state
7KY6: “Structure of the S. cerevisiae phosphatidylcholine flippase DNF1-LEM3 complex in the apo E1 state”. Electron microscopy, 3 ligands (NAG, MAN, MG). MolNFT v1 #180397 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KY6
- Type
- protein
- Length
- 1,322 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P32660, A0A6A5Q828
- Ligands
- NAG, MAN, MG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 957 | — | P32660 |
| B | — | protein | 365 | — | A0A6A5Q828 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KY6 · Structure of the S. cerevisiae phosphatidylcholine flippase Dnf1-Lem3 complex in the apo… · the same entry in another collection · chain A against A, TM-score 1.00
- P32660 · AlphaFold monomer V2.0 prediction for phospholipid-transporting ATPase DNF1 (P32660) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32660
- Every structure of UniProt A0A6A5Q828
- Elsewhere: RCSB PDB 7KY6 · PDBe 7KY6 · UniProt P32660 · UniProt A0A6A5Q828
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.