MolNFT v1 · #180349 · DNA
1,N6-ethenoadnine (E) in dsdna sequence (5'-cgcgeattcgcg-3')
7KWR · DNA (5'-D(*(DCZ)P*GP*CP*GP*(EDA)P*AP*TP*TP*CP*GP*CP*G)-3'): “1,N6-ethenoadnine (E) in dsdna sequence (5'-cgcgeattcgcg-3')”. Solution nmr. MolNFT v1 #180349 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KWR
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*(DCZ)P*GP*CP*GP*(EDA)P*AP*TP*TP*CP*GP*CP*G)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*(DCZ)P*GP*CP*GP*(EDA)P*AP*TP*TP*CP*GP*CP*G)-3') | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 666 Ų buried · 53 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 4 modified (nucleotide modification).
Compared structures
- 7KWR · 1,N6-ethenoadnine (E) in dsDNA sequence (5'-CGCGEATTCGCG-3') · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7KWR · PDBe 7KWR
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